BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011B05SP1|AL426157
(765 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1517 1508 0.0
>3x_Contig1517
Length = 8289
Score = 1508 bits (760), Expect = 0.0
Identities = 763/765 (99%)
Strand = Plus / Plus
Query: 1 gatctgtcggtagtaatcagttattacagcatcatcagcagcaacagcagcaacagcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2812 gatctgtcggtagtaatcagttattacagcatcatcagcagcaacagcagcaacagcagc 2871
Query: 61 nacaacaaccttccaatatgggaactctttatgcaattgtactgtatgattttcaagcag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2872 aacaacaaccttccaatatgggaactctttatgcaattgtactgtatgattttcaagcag 2931
Query: 121 aaaaggcagatgagttaacagcctatgccggagaaaacttgttcatttgtgctcatcacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2932 aaaaggcagatgagttaacagcctatgccggagaaaacttgttcatttgtgctcatcacg 2991
Query: 181 attttgaatggtttatcgctaagcccattggcaggttgggtggtcccggtctagttcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2992 attttgaatggtttatcgctaagcccattggcaggttgggtggtcccggtctagttcctg 3051
Query: 241 ttggttttgtgactattatagatatagctactggttatgccacgggaaatgatgtaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3052 ttggttttgtgactattatagatatagctactggttatgccacgggaaatgatgtaaaaa 3111
Query: 301 gcgatatcgaatcagtgaatctaccctcggtccaagaatggaagatcaatatcgcccgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3112 gcgatatcgaatcagtgaatctaccctcggtccaagaatggaagatcaatatcgcccgtt 3171
Query: 361 acaaggctagcaatatcacactaggttcagtggaacagcagggtcagtcgtacgtgcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3172 acaaggctagcaatatcacactaggttcagtggaacagcagggtcagtcgtacgtgcaac 3231
Query: 421 accgatcacaatccaggcaaaattcacaaaaccgtcaaccacaccccagcacgcagcact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3232 accgatcacaatccaggcaaaattcacaaaaccgtcaaccacaccccagcacgcagcact 3291
Query: 481 cgagcgctgccaatacaacctatcctgctgatgccgttttccttacctacgctgcagtcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3292 cgagcgctgccaatacaacctatcctgctgatgccgttttccttacctacgctgcagtcg 3351
Query: 541 agacatttttcctacaggacgataagtattggttccaagtctcgtgtcagttatccaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3352 agacatttttcctacaggacgataagtattggttccaagtctcgtgtcagttatccaaca 3411
Query: 601 acaccacgcgtattttgaagcgttattatgaagatttctatgatttacaagtwaagctac 660
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3412 acaccacgcgtattttgaagcgttattatgaagatttctatgatttacaagtaaagctac 3471
Query: 661 tcgatatcttccctgcagaagggggtaaactaagagacactaatggtcagtggacgaaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3472 tcgatatcttccctgcagaagggggtaaactaagagacactaatggtcagtggacgaaac 3531
Query: 721 gtataatgccatatataccgggtccagttccgtatgtgacagata 765
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3532 gtataatgccatatataccgggtccagttccgtatgtgacagata 3576
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4582
Number of Sequences: 1807
Number of extensions: 4582
Number of successful extensions: 193
Number of sequences better than 1.0e-20: 1
length of query: 765
length of database: 10,358,551
effective HSP length: 16
effective length of query: 749
effective length of database: 10,329,639
effective search space: 7736899611
effective search space used: 7736899611
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)